Moving Imaging Data Across CNT Servers¶
What this page tells you
Use rsync -avPhi source /destination to move data between cnt-fs, bscsub.pmacs.upenn.edu (davis_group), and borel.seas.upenn.edu; a trailing slash on the source moves contents without the top folder. Josh's diagram of the CNT servers is attached as a PDF.
to move top directory and content within
rsync -avPhi source/dir /destination/dir
example: rsync -avPhi /mnt/cnt-fs/imaging_process_fs/imaging_raw/Justin_images_nii mjosyula@bscsub.pmacs.upenn.edu:/project/davis_group/mjosyula
rsync -avPhi /mnt/cnt-fs/imaging_process_fs/imaging_raw/3T_819126/RIDXXXX mjosyula@bscsub.pmacs.upenn.edu:/project/davis_group/mjosyula
example: rsync -avPhi /project/davis_group/mjosyula/Justin_images_nii mjosyula@borel.seas.upenn.edu:/mnt/sauce/littlab/users/jchin09/projects/p1_7T_thalamus/source_data/3T_Clinical
rsync -avPhi /project/davis_group/mjosyula/Justin_images_nii mjosyula@borel.seas.upenn.edu:/data/Human_Data
rsync -avPhi /mnt/cnt-fs/imaging_process_fs/imaging_raw/ pennkey@bscsub.pmacs.upenn.edu:/project/davis_group/mjosyula
ssh mjosyula@borel.seas.upenn.edu
to move everything in top directory but not the top directory itself
rsync -avPhi source/dir /destination/dir/
example: rsync -avPhi /mnt/cnt-fs/imaging_process_fs/imaging_raw/3T_819126/ pennkey@bscsub.pmacs.upenn.edu:/project/davis_group
Josh's Diagram-